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Structure-Based Investigation Into Neurodegenerative Disease-Causing Amyloid Protein Fibrils
Structure-Based Investigation Into Neurodegenerative Disease-Causing Amyloid Protein Fibri...
Structure-Based Investigation Into Neurodegenerative Disease-Causing Amyloid Protein Fibrils

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자료유형  
 학위논문 서양
최종처리일시  
20250211153125
ISBN  
9798346859628
DDC  
574
저자명  
Cheng, Xinyi.
서명/저자  
Structure-Based Investigation Into Neurodegenerative Disease-Causing Amyloid Protein Fibrils
발행사항  
[Sl] : University of California, Los Angeles, 2024
발행사항  
Ann Arbor : ProQuest Dissertations & Theses, 2024
형태사항  
220 p
주기사항  
Source: Dissertations Abstracts International, Volume: 86-06, Section: B.
주기사항  
Advisor: Eisenberg, David S.
학위논문주기  
Thesis (Ph.D.)--University of California, Los Angeles, 2024.
초록/해제  
요약Amyloid proteins are widely prevalent both in normal biology and in disease. This curious protein folding phenomenon, into closely packed cross-β folds, has captivated scientists. Specifically, amyloid proteins are linked to a lot of neurodegeneration diseases, like amyloid β and tau in Alzheimer's disease's, TDP-43 in ALS and so on. Recently, with the advancement of structural biology techniques like cryogenic electron microscopy (cryoEM), we can finally visualize the atomic structure of such amyloid assemblies extracted directly from patients. Curiously, amyloid fibrils of the same protein would take on distinctive structures unique to a particular disease. This phenomenon is observed with tau protein in various tauopathies, and TDP-43 protein in various subtypes of FTLD-TDP. On the other hand, these proteins often take on heterogeneous amyloid structures in vivo that are completely different from pathological structures. With this knowledge in mind, more studies for diagnostics and therapeutics are conducted on patient-derived materials to preserve the pathological disease structures. In turn, a lot of studies into pathological amyloids in neurodegeneration has entered an era of "structure-based" research. Diagnostics like PET-tracers, therapeutics like small molecule drugs, and other research tools such as antibodies and cell lines all need to be designed with the target structure in mind. In this collection of thesis works, I investigated an antibody that seems to be specific for a particular amyloid structure formed by the protein tau. It is the first known antibody that can distinguish not aggregated protein from monomers, but also differentiates between different amyloid structures formed by the same protein. I also assisted in solving the first structure of an amyloid fibril bound with a small molecule disaggregant, and using insight from this structure continued to design and test small molecule disaggregants specifically targeted towards tau in the AD amyloid fold. Aside from tau, I also worked on TDP-43 and studied the structural landscape of TDP-43 in various diseases such as FTLD and ALS using a cell-based model. Overall, my work exemplifies the new frontier of structure-based amyloid research into neurodegeneration and showcases investigation into antibodies, small molecule disaggregants and cell models in the context of the ever-changing landscape of amyloid structures.
일반주제명  
Biochemistry
일반주제명  
Microbiology
일반주제명  
Neurosciences
일반주제명  
Molecular biology
키워드  
Alzheimer's disease
키워드  
Cryogenic electron microscopy
키워드  
Neurodegeneration
키워드  
Structural biology
키워드  
Tauopathies
기타저자  
University of California, Los Angeles Molecular Biology 0573
기본자료저록  
Dissertations Abstracts International. 86-06B.
전자적 위치 및 접속  
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MARC

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■1001  ▼aCheng,  Xinyi.
■24510▼aStructure-Based  Investigation  Into  Neurodegenerative  Disease-Causing  Amyloid  Protein  Fibrils
■260    ▼a[Sl]▼bUniversity  of  California,  Los  Angeles▼c2024
■260  1▼aAnn  Arbor▼bProQuest  Dissertations  &  Theses▼c2024
■300    ▼a220  p
■500    ▼aSource:  Dissertations  Abstracts  International,  Volume:  86-06,  Section:  B.
■500    ▼aAdvisor:  Eisenberg,  David  S.
■5021  ▼aThesis  (Ph.D.)--University  of  California,  Los  Angeles,  2024.
■520    ▼aAmyloid  proteins  are  widely  prevalent  both  in  normal  biology  and  in  disease.  This  curious  protein  folding  phenomenon,  into  closely  packed  cross-β  folds,  has  captivated  scientists.  Specifically,  amyloid  proteins  are  linked  to  a  lot  of  neurodegeneration  diseases,  like  amyloid  β  and  tau  in  Alzheimer's  disease's,  TDP-43  in  ALS  and  so  on.  Recently,  with  the  advancement  of  structural  biology  techniques  like  cryogenic  electron  microscopy  (cryoEM),  we  can  finally  visualize  the  atomic  structure  of  such  amyloid  assemblies  extracted  directly  from  patients.  Curiously,  amyloid  fibrils  of  the  same  protein  would  take  on  distinctive  structures  unique  to  a  particular  disease.  This  phenomenon  is  observed  with  tau  protein  in  various  tauopathies,  and  TDP-43  protein  in  various  subtypes  of  FTLD-TDP.  On  the  other  hand,  these  proteins  often  take  on  heterogeneous  amyloid  structures  in  vivo  that  are  completely  different  from  pathological  structures.  With  this  knowledge  in  mind,  more  studies  for  diagnostics  and  therapeutics  are  conducted  on  patient-derived  materials  to  preserve  the  pathological  disease  structures.  In  turn,  a  lot  of  studies  into  pathological  amyloids  in  neurodegeneration  has  entered  an  era  of  "structure-based"  research.  Diagnostics  like  PET-tracers,  therapeutics  like  small  molecule  drugs,  and  other  research  tools  such  as  antibodies  and  cell  lines  all  need  to  be  designed  with  the  target  structure  in  mind.  In  this  collection  of  thesis  works,  I  investigated  an  antibody  that  seems  to  be  specific  for  a  particular  amyloid  structure  formed  by  the  protein  tau.  It  is  the  first  known  antibody  that  can  distinguish  not  aggregated  protein  from  monomers,  but  also  differentiates  between  different  amyloid  structures  formed  by  the  same  protein.  I  also  assisted  in  solving  the  first  structure  of  an  amyloid  fibril  bound  with  a  small  molecule  disaggregant,  and  using  insight  from  this  structure  continued  to  design  and  test  small  molecule  disaggregants  specifically  targeted  towards  tau  in  the  AD  amyloid  fold.  Aside  from  tau,  I  also  worked  on  TDP-43  and  studied  the  structural  landscape  of  TDP-43  in  various  diseases  such  as  FTLD  and  ALS  using  a  cell-based  model.  Overall,  my  work  exemplifies  the  new  frontier  of  structure-based  amyloid  research  into  neurodegeneration  and  showcases  investigation  into  antibodies,  small  molecule  disaggregants  and  cell  models  in  the  context  of  the  ever-changing  landscape  of  amyloid  structures.
■590    ▼aSchool  code:  0031.
■650  4▼aBiochemistry
■650  4▼aMicrobiology
■650  4▼aNeurosciences
■650  4▼aMolecular  biology
■653    ▼aAlzheimer's  disease
■653    ▼aCryogenic  electron  microscopy
■653    ▼aNeurodegeneration
■653    ▼aStructural  biology
■653    ▼aTauopathies
■690    ▼a0487
■690    ▼a0410
■690    ▼a0317
■690    ▼a0307
■71020▼aUniversity  of  California,  Los  Angeles▼bMolecular  Biology  0573.
■7730  ▼tDissertations  Abstracts  International▼g86-06B.
■790    ▼a0031
■791    ▼aPh.D.
■792    ▼a2024
■793    ▼aEnglish
■85640▼uhttp://www.riss.kr/pdu/ddodLink.do?id=T17165111▼nKERIS▼z이  자료의  원문은  한국교육학술정보원에서  제공합니다.

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