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Manifold Learning in Structural Biology: Docking, Folding, and Simulation
Manifold Learning in Structural Biology: Docking, Folding, and Simulation
Manifold Learning in Structural Biology: Docking, Folding, and Simulation

상세정보

자료유형  
 학위논문 서양
최종처리일시  
20250211152111
ISBN  
9798384212102
DDC  
004
저자명  
Sha, Congzhou M.
서명/저자  
Manifold Learning in Structural Biology: Docking, Folding, and Simulation
발행사항  
[Sl] : The Pennsylvania State University, 2024
발행사항  
Ann Arbor : ProQuest Dissertations & Theses, 2024
형태사항  
306 p
주기사항  
Source: Dissertations Abstracts International, Volume: 86-03, Section: B.
주기사항  
Advisor: Dokholyan, Nikolay V.
학위논문주기  
Thesis (Ph.D.)--The Pennsylvania State University, 2024.
초록/해제  
요약Machine learning and neural networks are used in many areas of science to perform data fitting, automation, and inference. However, these methods are often used as black boxes, leading to uncertainty on the scientist's part in their accuracy and robustness. Many problems in structural biology may be addressed using machine learning techniques, from virtual drug docking and RNA 3D structure to molecular dynamics. In order to use machine learning effectively, I have constructed principled and rational methods based on physics, geometry, and symmetry to address problems in structural biology. By taking advantage of fundamental mathematical properties in the problems under consideration, we are able to (1) develop efficient, accurate, and trustworthy inferential models and (2) abstract away from the details of the problem and develop general methods applicable to other areas of science. The choices I have made in constructing these methods reflect our current understanding of deep learning, the structure of scientific data, and the mathematical principles underlying our models of Nature.
일반주제명  
Quantum computing
일반주제명  
Biology
일반주제명  
Statistical mechanics
일반주제명  
Quantum physics
일반주제명  
Neural networks
일반주제명  
Markov analysis
일반주제명  
Symmetry
일반주제명  
Computational physics
일반주제명  
Statistical physics
기타저자  
The Pennsylvania State University.
기본자료저록  
Dissertations Abstracts International. 86-03B.
전자적 위치 및 접속  
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MARC

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■1001  ▼aSha,  Congzhou  M.
■24510▼aManifold  Learning  in  Structural  Biology:  Docking,  Folding,  and  Simulation
■260    ▼a[Sl]▼bThe  Pennsylvania  State  University▼c2024
■260  1▼aAnn  Arbor▼bProQuest  Dissertations  &  Theses▼c2024
■300    ▼a306  p
■500    ▼aSource:  Dissertations  Abstracts  International,  Volume:  86-03,  Section:  B.
■500    ▼aAdvisor:  Dokholyan,  Nikolay  V.
■5021  ▼aThesis  (Ph.D.)--The  Pennsylvania  State  University,  2024.
■520    ▼aMachine  learning  and  neural  networks  are  used  in  many  areas  of  science  to  perform  data  fitting,  automation,  and  inference.  However,  these  methods  are  often  used  as  black  boxes,  leading  to  uncertainty  on  the  scientist's  part  in  their  accuracy  and  robustness.  Many  problems  in  structural  biology  may  be  addressed  using  machine  learning  techniques,  from  virtual  drug  docking  and  RNA  3D  structure  to  molecular  dynamics.  In  order  to  use  machine  learning  effectively,  I  have  constructed  principled  and  rational  methods  based  on  physics,  geometry,  and  symmetry  to  address  problems  in  structural  biology.  By  taking  advantage  of  fundamental  mathematical  properties  in  the  problems  under  consideration,  we  are  able  to  (1)  develop  efficient,  accurate,  and  trustworthy  inferential  models  and  (2)  abstract  away  from  the  details  of  the  problem  and  develop  general  methods  applicable  to  other  areas  of  science.  The  choices  I  have  made  in  constructing  these  methods  reflect  our  current  understanding  of  deep  learning,  the  structure  of  scientific  data,  and  the  mathematical  principles  underlying  our  models  of  Nature.
■590    ▼aSchool  code:  0176.
■650  4▼aQuantum  computing
■650  4▼aBiology
■650  4▼aStatistical  mechanics
■650  4▼aQuantum  physics
■650  4▼aNeural  networks
■650  4▼aMarkov  analysis
■650  4▼aSymmetry
■650  4▼aComputational  physics
■650  4▼aStatistical  physics
■690    ▼a0599
■690    ▼a0306
■690    ▼a0800
■690    ▼a0216
■690    ▼a0796
■690    ▼a0217
■71020▼aThe  Pennsylvania  State  University.
■7730  ▼tDissertations  Abstracts  International▼g86-03B.
■790    ▼a0176
■791    ▼aPh.D.
■792    ▼a2024
■793    ▼aEnglish
■85640▼uhttp://www.riss.kr/pdu/ddodLink.do?id=T17162914▼nKERIS▼z이  자료의  원문은  한국교육학술정보원에서  제공합니다.

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