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Computationally Guided Engineering of Cell-Selective Cytokines
Computationally Guided Engineering of Cell-Selective Cytokines
Computationally Guided Engineering of Cell-Selective Cytokines

상세정보

자료유형  
 학위논문 서양
최종처리일시  
20250211151507
ISBN  
9798382728643
DDC  
610
저자명  
Orcutt-Jahns, Brian Thomas.
서명/저자  
Computationally Guided Engineering of Cell-Selective Cytokines
발행사항  
[Sl] : University of California, Los Angeles, 2024
발행사항  
Ann Arbor : ProQuest Dissertations & Theses, 2024
형태사항  
151 p
주기사항  
Source: Dissertations Abstracts International, Volume: 85-11, Section: B.
주기사항  
Advisor: Meyer, Aaron S.
학위논문주기  
Thesis (Ph.D.)--University of California, Los Angeles, 2024.
초록/해제  
요약Cytokine signaling a core mechanism by which immune activity is regulated in both health and disease. Cytokine-mediated signaling regulates the proliferation, differentiation, and activity of cells in both the innate and adaptive immune systems. Due to their powerful regulatory capacity, cytokines have been leveraged as immunotherapies in a wide range of disease indications; for example, interleukin-2 (IL-2) has been explored as a potential immunostimulant for the treatment for cancer, as well as an immunosuppressant for the treatment of autoimmune diseases. However, in many such cases, the pleiotropic nature of cytokine signaling has stymied the development of efficacious and safe therapies due to the induction of signaling in off-target populations. To overcome this limitation and bias cytokines towards signaling in target populations, engineered cytokines with a variety of alterations, such as mutations affecting their binding interactions with their cognate receptors, fusion to antibody fragments, or co-formulation with antibodies to that cytokine have been developed. However, without a quantitative model of signaling the effects of such mutations and alterations are often difficult to anticipate, leading to inefficient cytokine engineering efforts. To address this lack of quantitative understanding, we conducted a battery of computational studies. First, using a mechanistic binding model, we developed a general, quantitative understanding of the landscape of cell-selective cytokine signaling, and found that affinity, valency, and multi-specificity must be simultaneously optimized to engineer optimally selective cytokines. We then specifically studied the IL-2 signaling pathway, and used both ordinary differential equation models and our mechanistic binding model to study the signaling characteristics of wild-type and engineered IL-2 mutants. Leveraging our newfound quantitative of how affinity and valency interact to determine a cytokine's selectivity profile both generally and in the specific context of IL-2, we developed affinity-optimized tetravalent IL-2 mutants with superior regulatory cell selectivity. Using these models of IL-2 signaling, we also elucidated the mechanism by which engineered antibody-IL-2 fusions induced regulatory cell-selective signaling and conferred protection against autoimmunity. In total, this body of work demonstrates the critical role that computational modeling plays in potentiating the engineering of superior cytokine-based immunotherapies.
일반주제명  
Biomedical engineering
일반주제명  
Bioinformatics
일반주제명  
Bioengineering
일반주제명  
Immunology
키워드  
Cytokines
키워드  
Immune suppression
키워드  
Interleukin-2
키워드  
Protein engineering
키워드  
Systems biology
키워드  
Immunotherapy
기타저자  
University of California, Los Angeles Bioengineering 0288
기본자료저록  
Dissertations Abstracts International. 85-11B.
전자적 위치 및 접속  
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MARC

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■1001  ▼aOrcutt-Jahns,  Brian  Thomas.
■24510▼aComputationally  Guided  Engineering  of  Cell-Selective  Cytokines
■260    ▼a[Sl]▼bUniversity  of  California,  Los  Angeles▼c2024
■260  1▼aAnn  Arbor▼bProQuest  Dissertations  &  Theses▼c2024
■300    ▼a151  p
■500    ▼aSource:  Dissertations  Abstracts  International,  Volume:  85-11,  Section:  B.
■500    ▼aAdvisor:  Meyer,  Aaron  S.
■5021  ▼aThesis  (Ph.D.)--University  of  California,  Los  Angeles,  2024.
■520    ▼aCytokine  signaling  a  core  mechanism  by  which  immune  activity  is  regulated  in  both  health  and  disease.  Cytokine-mediated  signaling  regulates  the  proliferation,  differentiation,  and  activity  of  cells  in  both  the  innate  and  adaptive  immune  systems.  Due  to  their  powerful  regulatory  capacity,  cytokines  have  been  leveraged  as  immunotherapies  in  a  wide  range  of  disease  indications;  for  example,  interleukin-2  (IL-2)  has  been  explored  as  a  potential  immunostimulant  for  the  treatment  for  cancer,  as  well  as  an  immunosuppressant  for  the  treatment  of  autoimmune  diseases.  However,  in  many  such  cases,  the  pleiotropic  nature  of  cytokine  signaling  has  stymied  the  development  of  efficacious  and  safe  therapies  due  to  the  induction  of  signaling  in  off-target  populations.  To  overcome  this  limitation  and  bias  cytokines  towards  signaling  in  target  populations,  engineered  cytokines  with  a  variety  of  alterations,  such  as  mutations  affecting  their  binding  interactions  with  their  cognate  receptors,  fusion  to  antibody  fragments,  or  co-formulation  with  antibodies  to  that  cytokine  have  been  developed.  However,  without  a  quantitative  model  of  signaling  the  effects  of  such  mutations  and  alterations  are  often  difficult  to  anticipate,  leading  to  inefficient  cytokine  engineering  efforts.  To  address  this  lack  of  quantitative  understanding,  we  conducted  a  battery  of  computational  studies.  First,  using  a  mechanistic  binding  model,  we  developed  a  general,  quantitative  understanding  of  the  landscape  of  cell-selective  cytokine  signaling,  and  found  that  affinity,  valency,  and  multi-specificity  must  be  simultaneously  optimized  to  engineer  optimally  selective  cytokines.  We  then  specifically  studied  the  IL-2  signaling  pathway,  and  used  both  ordinary  differential  equation  models  and  our  mechanistic  binding  model  to  study  the  signaling  characteristics  of  wild-type  and  engineered  IL-2  mutants.  Leveraging  our  newfound  quantitative  of  how  affinity  and  valency  interact  to  determine  a  cytokine's  selectivity  profile  both  generally  and  in  the  specific  context  of  IL-2,  we  developed  affinity-optimized  tetravalent  IL-2  mutants  with  superior  regulatory  cell  selectivity.  Using  these  models  of  IL-2  signaling,  we  also  elucidated  the  mechanism  by  which  engineered  antibody-IL-2  fusions  induced  regulatory  cell-selective  signaling  and  conferred  protection  against  autoimmunity.  In  total,  this  body  of  work  demonstrates  the  critical  role  that  computational  modeling  plays  in  potentiating  the  engineering  of  superior  cytokine-based  immunotherapies.
■590    ▼aSchool  code:  0031.
■650  4▼aBiomedical  engineering
■650  4▼aBioinformatics
■650  4▼aBioengineering
■650  4▼aImmunology
■653    ▼aCytokines
■653    ▼aImmune  suppression
■653    ▼aInterleukin-2
■653    ▼aProtein  engineering
■653    ▼aSystems  biology
■653    ▼aImmunotherapy
■690    ▼a0541
■690    ▼a0715
■690    ▼a0202
■690    ▼a0982
■71020▼aUniversity  of  California,  Los  Angeles▼bBioengineering  0288.
■7730  ▼tDissertations  Abstracts  International▼g85-11B.
■790    ▼a0031
■791    ▼aPh.D.
■792    ▼a2024
■793    ▼aEnglish
■85640▼uhttp://www.riss.kr/pdu/ddodLink.do?id=T17161956▼nKERIS▼z이  자료의  원문은  한국교육학술정보원에서  제공합니다.

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