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Genes, Omics, and Justice: Bridging the Gaps in Computational Precision Medicine
Genes, Omics, and Justice: Bridging the Gaps in Computational Precision Medicine
Genes, Omics, and Justice: Bridging the Gaps in Computational Precision Medicine

상세정보

자료유형  
 학위논문 서양
최종처리일시  
20260202104829
ISBN  
9798293855742
DDC  
575
저자명  
Guardado, Miguel.
서명/저자  
Genes, Omics, and Justice: Bridging the Gaps in Computational Precision Medicine
발행사항  
[Sl] : University of California, San Francisco, 2025
발행사항  
Ann Arbor : ProQuest Dissertations & Theses, 2025
형태사항  
167 p
주기사항  
Source: Dissertations Abstracts International, Volume: 87-03, Section: B.
주기사항  
Advisor: Hernandez, Ryan D.;Torgerson, Dara G.
학위논문주기  
Thesis (Ph.D.)--University of California, San Francisco, 2025.
초록/해제  
요약Precision medicine seeks to tailor healthcare based on individual genetic and molecular profiles. However, most existing tools and datasets were developed using Eurocentric cohorts, limiting their accuracy and equity across diverse populations. This dissertation addresses disparities in precision medicine through the development and application of computational approaches rooted in evolutionary theory, population genetics, and multi-omic technologies. I first introduce py_ped_sim, a simulation tool to evaluate the performance of kinship inference methods across varied ancestry backgrounds. I then apply untargeted metabolomics to examine postnatal metabolic changes linked to respiratory disease in extremely premature infants. In a large-scale genome study using data from the TOPMed consortium, I assess ultra-rare variant patterns and show how genetic ancestry shapes trait architecture and variant discovery. Finally, I reflect on my efforts to foster equity in science through mentorship, community engagement, and systemic change. Across these chapters, I use diverse data types, including simulated pedigrees, whole-genome sequences, and metabolomic profiles, to highlight the scientific and ethical importance of centering equity in research design. These findings emphasize that meaningful progress in precision medicine depends not only on technical innovation but also on addressing the structural and social factors that contribute to disparities that are seen in biomedical studies.
일반주제명  
Genetics
일반주제명  
Epidemiology
일반주제명  
Bioinformatics
일반주제명  
Biomedical engineering
키워드  
Community organizing
키워드  
Forensic genetics
키워드  
Health disparities
키워드  
Medical genetics
키워드  
Multi-omics
키워드  
Population genetics
기타저자  
University of California, San Francisco Biological and Medical Informatics
기본자료저록  
Dissertations Abstracts International. 87-03B.
전자적 위치 및 접속  
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MARC

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■1001  ▼aGuardado,  Miguel.▼0(orcid)0000-0002-1748-3956
■24510▼aGenes,  Omics,  and  Justice:  Bridging  the  Gaps  in  Computational  Precision  Medicine
■260    ▼a[Sl]▼bUniversity  of  California,  San  Francisco▼c2025
■260  1▼aAnn  Arbor▼bProQuest  Dissertations  &  Theses▼c2025
■300    ▼a167  p
■500    ▼aSource:  Dissertations  Abstracts  International,  Volume:  87-03,  Section:  B.
■500    ▼aAdvisor:  Hernandez,  Ryan  D.;Torgerson,  Dara  G.
■5021  ▼aThesis  (Ph.D.)--University  of  California,  San  Francisco,  2025.
■520    ▼aPrecision  medicine  seeks  to  tailor  healthcare  based  on  individual  genetic  and  molecular  profiles.  However,  most  existing  tools  and  datasets  were  developed  using  Eurocentric  cohorts,  limiting  their  accuracy  and  equity  across  diverse  populations.  This  dissertation  addresses  disparities  in  precision  medicine  through  the  development  and  application  of  computational  approaches  rooted  in  evolutionary  theory,  population  genetics,  and  multi-omic  technologies.  I  first  introduce  py_ped_sim,  a  simulation  tool  to  evaluate  the  performance  of  kinship  inference  methods  across  varied  ancestry  backgrounds.  I  then  apply  untargeted  metabolomics  to  examine  postnatal  metabolic  changes  linked  to  respiratory  disease  in  extremely  premature  infants.  In  a  large-scale  genome  study  using  data  from  the  TOPMed  consortium,  I  assess  ultra-rare  variant  patterns  and  show  how  genetic  ancestry  shapes  trait  architecture  and  variant  discovery.  Finally,  I  reflect  on  my  efforts  to  foster  equity  in  science  through  mentorship,  community  engagement,  and  systemic  change.  Across  these  chapters,  I  use  diverse  data  types,  including  simulated  pedigrees,  whole-genome  sequences,  and  metabolomic  profiles,  to  highlight  the  scientific  and  ethical  importance  of  centering  equity  in  research  design.  These  findings  emphasize  that  meaningful  progress  in  precision  medicine  depends  not  only  on  technical  innovation  but  also  on  addressing  the  structural  and  social  factors  that  contribute  to  disparities  that  are  seen  in  biomedical  studies.
■590    ▼aSchool  code:  0034.
■650  4▼aGenetics
■650  4▼aEpidemiology
■650  4▼aBioinformatics
■650  4▼aBiomedical  engineering
■653    ▼aCommunity  organizing
■653    ▼aForensic  genetics
■653    ▼aHealth  disparities
■653    ▼aMedical  genetics
■653    ▼aMulti-omics
■653    ▼aPopulation  genetics
■690    ▼a0369
■690    ▼a0766
■690    ▼a0715
■690    ▼a0541
■71020▼aUniversity  of  California,  San  Francisco▼bBiological  and  Medical  Informatics.
■7730  ▼tDissertations  Abstracts  International▼g87-03B.
■790    ▼a0034
■791    ▼aPh.D.
■792    ▼a2025
■793    ▼aEnglish
■85640▼uhttp://www.riss.kr/pdu/ddodLink.do?id=T17359065▼nKERIS▼z이  자료의  원문은  한국교육학술정보원에서  제공합니다.

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