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Phase Field Models of Tissue Mechanics and Cell Migration
Phase Field Models of Tissue Mechanics and Cell Migration
Phase Field Models of Tissue Mechanics and Cell Migration

상세정보

자료유형  
 학위논문 서양
최종처리일시  
20260202104719
ISBN  
9798297683945
DDC  
530
저자명  
Hopkins, Austin Curran.
서명/저자  
Phase Field Models of Tissue Mechanics and Cell Migration
발행사항  
[Sl] : University of California, Santa Barbara, 2025
발행사항  
Ann Arbor : ProQuest Dissertations & Theses, 2025
형태사항  
215 p
주기사항  
Source: Dissertations Abstracts International, Volume: 87-04, Section: B.
주기사항  
Advisor: Marchetti, M. Cristina.
학위논문주기  
Thesis (Ph.D.)--University of California, Santa Barbara, 2025.
초록/해제  
요약Biological tissues are living materials whose complex mechanical and rheological properties regulate many functions of life. Because tissues are made from individual cells, they pose an interesting opportunity for physics to connect tissue scale properties with single-cell scale ones. However, tissues are soft, living materials which poses a challenge for physics-based approaches. This thesis will consider a particular model for cell shape, known as the phase field model, and apply it to problems in tissue mechanics and cell migration. We first study a method for reading out rheological properties of a tissue via motion of a forced probe inside a confluent tissue. We analyze the motion of the probe as well as the deformations induced in the tissue. We find that the existence of a threshold force for the motion of the probe can be a measure of the rheological state, and study its dependence on cell properties such as motility and tension. We then move to the case of a non-confluent tissue and examine how cell motility and tension affect aggregation. We connect these results to existing active matter physics theories of motility-induced phase separation. The deformability of the cells can significantly affect their ability to aggregate and this effect can be understood in terms of the duration of simple two-body collisions. We also make developments on the modeling side by explicitly connecting two dimensional phase field models with three dimensional ones and incorporate a cell-cell friction which captures the role of cell adhesion proteins, such as E-cadherins. The intercellular friction can significantly affect the solid-liquid transition and creates spatial velocity correlations within the tissue. Finally, we propose intercellular friction as a mechanism for the emergence of local hexatic and nematic order in epithelial tissues. The correlations in defects in each of these kinds of order can be understood in terms of a simple geometric picture.
일반주제명  
Physics
일반주제명  
Biophysics
일반주제명  
Cellular biology
키워드  
Cell migration
키워드  
Phase field model
키워드  
Tissue rheology
키워드  
Biological tissues
키워드  
Cell motility
기타저자  
University of California, Santa Barbara Physics
기본자료저록  
Dissertations Abstracts International. 87-04B.
전자적 위치 및 접속  
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MARC

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■006m          o    d                
■007cr#unu||||||||
■020    ▼a9798297683945
■035    ▼a(MiAaPQ)AAI32120965
■040    ▼aMiAaPQ▼cMiAaPQ
■0820  ▼a530
■1001  ▼aHopkins,  Austin  Curran.
■24510▼aPhase  Field  Models  of  Tissue  Mechanics  and  Cell  Migration
■260    ▼a[Sl]▼bUniversity  of  California,  Santa  Barbara▼c2025
■260  1▼aAnn  Arbor▼bProQuest  Dissertations  &  Theses▼c2025
■300    ▼a215  p
■500    ▼aSource:  Dissertations  Abstracts  International,  Volume:  87-04,  Section:  B.
■500    ▼aAdvisor:  Marchetti,  M.  Cristina.
■5021  ▼aThesis  (Ph.D.)--University  of  California,  Santa  Barbara,  2025.
■520    ▼aBiological  tissues  are  living  materials  whose  complex  mechanical  and  rheological  properties  regulate  many  functions  of  life.  Because  tissues  are  made  from  individual  cells,  they  pose  an  interesting  opportunity  for  physics  to  connect  tissue  scale  properties  with  single-cell  scale  ones.  However,  tissues  are  soft,  living  materials  which  poses  a  challenge  for  physics-based  approaches.  This  thesis  will  consider  a  particular  model  for  cell  shape,  known  as  the  phase  field  model,  and  apply  it  to  problems  in  tissue  mechanics  and  cell  migration.  We  first  study  a  method  for  reading  out  rheological  properties  of  a  tissue  via  motion  of  a  forced  probe  inside  a  confluent  tissue.  We  analyze  the  motion  of  the  probe  as  well  as  the  deformations  induced  in  the  tissue.  We  find  that  the  existence  of  a  threshold  force  for  the  motion  of  the  probe  can  be  a  measure  of  the  rheological  state,  and  study  its  dependence  on  cell  properties  such  as  motility  and  tension.  We  then  move  to  the  case  of  a  non-confluent  tissue  and  examine  how  cell  motility  and  tension  affect  aggregation.  We  connect  these  results  to  existing  active  matter  physics  theories  of  motility-induced  phase  separation.  The  deformability  of  the  cells  can  significantly  affect  their  ability  to  aggregate  and  this  effect  can  be  understood  in  terms  of  the  duration  of  simple  two-body  collisions.  We  also  make  developments  on  the  modeling  side  by  explicitly  connecting  two  dimensional  phase  field  models  with  three  dimensional  ones  and  incorporate  a  cell-cell  friction  which  captures  the  role  of  cell  adhesion  proteins,  such  as  E-cadherins.  The  intercellular  friction  can  significantly  affect  the  solid-liquid  transition  and  creates  spatial  velocity  correlations  within  the  tissue.  Finally,  we  propose  intercellular  friction  as  a  mechanism  for  the  emergence  of  local  hexatic  and  nematic  order  in  epithelial  tissues.  The  correlations  in  defects  in  each  of  these  kinds  of  order  can  be  understood  in  terms  of  a  simple  geometric  picture.
■590    ▼aSchool  code:  0035.
■650  4▼aPhysics
■650  4▼aBiophysics
■650  4▼aCellular  biology
■653    ▼aCell  migration
■653    ▼aPhase  field  model
■653    ▼aTissue  rheology
■653    ▼aBiological  tissues
■653    ▼aCell  motility
■690    ▼a0605
■690    ▼a0786
■690    ▼a0379
■71020▼aUniversity  of  California,  Santa  Barbara▼bPhysics.
■7730  ▼tDissertations  Abstracts  International▼g87-04B.
■790    ▼a0035
■791    ▼aPh.D.
■792    ▼a2025
■793    ▼aEnglish
■85640▼uhttp://www.riss.kr/pdu/ddodLink.do?id=T17358559▼nKERIS▼z이  자료의  원문은  한국교육학술정보원에서  제공합니다.

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