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The Fate of Siderophores: Biotic Degradation of Siderophores
The Fate of Siderophores: Biotic Degradation of Siderophores
상세정보
- 자료유형
- 학위논문 서양
- 최종처리일시
- 20260202105629
- ISBN
- 9798297619388
- DDC
- 600
- 서명/저자
- The Fate of Siderophores: Biotic Degradation of Siderophores
- 발행사항
- [Sl] : North Carolina State University, 2025
- 발행사항
- Ann Arbor : ProQuest Dissertations & Theses, 2025
- 형태사항
- 208 p
- 주기사항
- Source: Dissertations Abstracts International, Volume: 87-04, Section: B.
- 주기사항
- Advisor: Ghiladi, Reza;Duckworth, Owen.
- 학위논문주기
- Thesis (Ph.D.)--North Carolina State University, 2025.
- 초록/해제
- 요약Siderophores are low-molecular weight biomolecules with a high affinity for ferric iron (FeIII) that are critical to iron (Fe) acquisition in both plants and microbes, particularly in iron-limited environments. Although their biosynthesis and biology have been extensively studied, little is known about the environmental fate of siderophores, including their potential reactions with common degradative enzymes and interactions with plant-associated microbes, which may influence or hinder the ability to promote the uptake of Fe for plants and microbes.To address these knowledge gaps, the goals of this dissertation were to: (i) assess the potential of extracellular soil enzymes (including phenol oxidase, peroxidase, and protease) to degrade siderophores and investigate their antagonistic effects; (ii) investigate the biotic degradation of siderophores by microbial symbionts and their role in influencing siderophore stability and facilitating Fe uptake systems; and (iii) conduct a detailed examination of the biochemical mechanisms underlying siderophore degradation, evaluate the significance of siderophores in facilitating Fe acquisition in fungi, and analyze the role of fungal species in producing and utilizing siderophores for efficient Fe uptake. A suite of analytical techniques, including reaction kinetics, liquid chromatography-mass spectrometry (LC-MS), high-resolution mass spectrometry, UV-Visible spectrophotometry, and nuclear magnetic resonance (NMR) spectroscopy, was employed to examine reactivities and structural modifications of siderophores under environmentally relevant conditions. The findings revealed that siderophore degradation by extracellular oxidative enzymes was highly dependent on structure, FeIII complexation, and pH. Notably, free (apo-) siderophores exhibited significantly higher degradation rates (90%) than their Fe-bound counterparts. Hydrogen peroxide (H₂O₂) was found to promote degradation even in the absence of enzymatic catalysis, particularly affecting catecholate-type siderophores such as protochelin. These degradation kinetics suggest that microbial extracellular enzymes in soil microbiomes may contribute to the turnover of plant- or microbe-derived siderophores, thereby modulating Fe availability in competitive ecosystems.Additionally, the root-associated fungus Pyrenophora biseptata was shown to degrade the hydroxamate siderophore desferrioxamine B (DFOB) under iron-limiting, mildly acidic to neutral conditions. Tandem MS/MS and spectral analyses demonstrated the loss of structural hydroxamate groups not only from DFOB but also from the fungus's own tris-hydroxamate siderophores (e.g., Neocoprogen I/II, Coprogen, Dimerum acid). The observed degradation results were linked to the fungus's reductive Fe uptake pathway, wherein the formation of transient FeII species reduces hydroxamate moieties, forming amides without Fe chelating abilities. This siderophore-inactivating behavior was found to be common among diverse fungi possessing genes for the reductive Fe uptake system, suggesting a self-regulatory or competitive mechanism that influences Fe bioavailability within plant-fungal symbioses and surrounding microbiomes.
- 일반주제명
- Metals
- 일반주제명
- Fungi
- 일반주제명
- Bioremediation
- 일반주제명
- Toxicity
- 일반주제명
- Bacteria
- 일반주제명
- Nutrition
- 일반주제명
- Gram-positive bacteria
- 일반주제명
- Crops
- 일반주제명
- Crop diseases
- 일반주제명
- E coli
- 일반주제명
- Gram-negative bacteria
- 일반주제명
- Climate change
- 일반주제명
- Plant diseases
- 일반주제명
- Bioavailability
- 일반주제명
- Acidification
- 일반주제명
- Environmental conditions
- 일반주제명
- Oxidation
- 일반주제명
- Iron
- 일반주제명
- Agricultural management
- 일반주제명
- Phenols
- 일반주제명
- Plant growth
- 일반주제명
- Microorganisms
- 일반주제명
- Biochemistry
- 키워드
- Siderophores
- 기본자료저록
- Dissertations Abstracts International. 87-04B.
- 전자적 위치 및 접속
- 로그인 후 원문을 볼 수 있습니다.
MARC
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■00520260202105629
■006m o d
■007cr#unu||||||||
■020 ▼a9798297619388
■035 ▼a(MiAaPQ)AAI32331427
■040 ▼aMiAaPQ▼cMiAaPQ
■0820 ▼a600
■1001 ▼aChukwuma, Chinazam Emmanuel.
■24510▼aThe Fate of Siderophores: Biotic Degradation of Siderophores
■260 ▼a[Sl]▼bNorth Carolina State University▼c2025
■260 1▼aAnn Arbor▼bProQuest Dissertations & Theses▼c2025
■300 ▼a208 p
■500 ▼aSource: Dissertations Abstracts International, Volume: 87-04, Section: B.
■500 ▼aAdvisor: Ghiladi, Reza;Duckworth, Owen.
■5021 ▼aThesis (Ph.D.)--North Carolina State University, 2025.
■520 ▼aSiderophores are low-molecular weight biomolecules with a high affinity for ferric iron (FeIII) that are critical to iron (Fe) acquisition in both plants and microbes, particularly in iron-limited environments. Although their biosynthesis and biology have been extensively studied, little is known about the environmental fate of siderophores, including their potential reactions with common degradative enzymes and interactions with plant-associated microbes, which may influence or hinder the ability to promote the uptake of Fe for plants and microbes.To address these knowledge gaps, the goals of this dissertation were to: (i) assess the potential of extracellular soil enzymes (including phenol oxidase, peroxidase, and protease) to degrade siderophores and investigate their antagonistic effects; (ii) investigate the biotic degradation of siderophores by microbial symbionts and their role in influencing siderophore stability and facilitating Fe uptake systems; and (iii) conduct a detailed examination of the biochemical mechanisms underlying siderophore degradation, evaluate the significance of siderophores in facilitating Fe acquisition in fungi, and analyze the role of fungal species in producing and utilizing siderophores for efficient Fe uptake. A suite of analytical techniques, including reaction kinetics, liquid chromatography-mass spectrometry (LC-MS), high-resolution mass spectrometry, UV-Visible spectrophotometry, and nuclear magnetic resonance (NMR) spectroscopy, was employed to examine reactivities and structural modifications of siderophores under environmentally relevant conditions. The findings revealed that siderophore degradation by extracellular oxidative enzymes was highly dependent on structure, FeIII complexation, and pH. Notably, free (apo-) siderophores exhibited significantly higher degradation rates (90%) than their Fe-bound counterparts. Hydrogen peroxide (H₂O₂) was found to promote degradation even in the absence of enzymatic catalysis, particularly affecting catecholate-type siderophores such as protochelin. These degradation kinetics suggest that microbial extracellular enzymes in soil microbiomes may contribute to the turnover of plant- or microbe-derived siderophores, thereby modulating Fe availability in competitive ecosystems.Additionally, the root-associated fungus Pyrenophora biseptata was shown to degrade the hydroxamate siderophore desferrioxamine B (DFOB) under iron-limiting, mildly acidic to neutral conditions. Tandem MS/MS and spectral analyses demonstrated the loss of structural hydroxamate groups not only from DFOB but also from the fungus's own tris-hydroxamate siderophores (e.g., Neocoprogen I/II, Coprogen, Dimerum acid). The observed degradation results were linked to the fungus's reductive Fe uptake pathway, wherein the formation of transient FeII species reduces hydroxamate moieties, forming amides without Fe chelating abilities. This siderophore-inactivating behavior was found to be common among diverse fungi possessing genes for the reductive Fe uptake system, suggesting a self-regulatory or competitive mechanism that influences Fe bioavailability within plant-fungal symbioses and surrounding microbiomes.
■590 ▼aSchool code: 0155.
■650 4▼aMetals
■650 4▼aFungi
■650 4▼aBioremediation
■650 4▼aToxicity
■650 4▼aBacteria
■650 4▼aNutrition
■650 4▼aGram-positive bacteria
■650 4▼aCrops
■650 4▼aCrop diseases
■650 4▼aE coli
■650 4▼aGram-negative bacteria
■650 4▼aClimate change
■650 4▼aPlant diseases
■650 4▼aBioavailability
■650 4▼aAcidification
■650 4▼aEnvironmental conditions
■650 4▼aOxidation
■650 4▼aIron
■650 4▼aAgricultural management
■650 4▼aPhenols
■650 4▼aPlant growth
■650 4▼aMicroorganisms
■650 4▼aBiochemistry
■653 ▼aSiderophores
■653 ▼aBiotic degradation
■690 ▼a0570
■690 ▼a0404
■690 ▼a0487
■71020▼aNorth Carolina State University.
■7730 ▼tDissertations Abstracts International▼g87-04B.
■790 ▼a0155
■791 ▼aPh.D.
■792 ▼a2025
■793 ▼aEnglish
■85640▼uhttp://www.riss.kr/pdu/ddodLink.do?id=T17360861▼nKERIS▼z이 자료의 원문은 한국교육학술정보원에서 제공합니다.


