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Identifying Blood-Based Biomarkers of Efficacy, Toxicity and Outcome in Early-Stage Breast Cancer
Identifying Blood-Based Biomarkers of Efficacy, Toxicity and Outcome in Early-Stage Breast...
Identifying Blood-Based Biomarkers of Efficacy, Toxicity and Outcome in Early-Stage Breast Cancer

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자료유형  
 학위논문 서양
최종처리일시  
20260202103148
ISBN  
9798280752023
DDC  
615
저자명  
Alkhafaji, Silver.
서명/저자  
Identifying Blood-Based Biomarkers of Efficacy, Toxicity and Outcome in Early-Stage Breast Cancer
발행사항  
[Sl] : University of California, San Francisco, 2025
발행사항  
Ann Arbor : ProQuest Dissertations & Theses, 2025
형태사항  
100 p
주기사항  
Source: Dissertations Abstracts International, Volume: 86-12, Section: B.
주기사항  
Includes supplementary digital materials.
주기사항  
Advisor: Veer, Laura Van 'T;Kroetz, Deanna.
학위논문주기  
Thesis (Ph.D.)--University of California, San Francisco, 2025.
초록/해제  
요약The emergence of blood-based biomarkers has transformed the landscape of precision oncology, offering minimally invasive tools to guide treatment decisions and monitor disease dynamics. This dissertation investigates the prognostic and predictive value of circulating tumor cells (CTCs), cell-free orphan non-coding RNAs (oncRNAs), and serum immune markers in early-stage breast cancer, leveraging the TIPPING and I-SPY2 clinical trial platforms.In Chapter 2, we evaluated CTCs in the TIPPING study, revealing that patients with invasive lobular carcinoma (ILC) have significantly higher CTC counts than those with invasive ductal carcinoma (IDC), even at early disease stages. These histology-specific differences were associated with worse outcomes and support the implementation of subtype-specific CTC thresholds for prognostication and therapeutic stratification.Chapter 3 focused on the development and validation of a continuous oncRNA risk score derived from circulating cfRNAs in the I-SPY2 trial. The score was predictive of distant recurrence-free survival (DRFS) and provided prognostic value independent of established clinicopathologic features, including Residual Cancer Burden (RCB), nodal status, and MammaPrint risk. These findings support the clinical utility of tumor-naive cfRNA assays for individualized recurrence risk assessment.In Chapter 4, we explored serum immune markers as early indicators of treatment response and immune-related adverse events (irAEs) in patients treated with immune checkpoint inhibitors within I-SPY2. Specific cytokines and checkpoint molecules were associated with both pathologic complete response (pCR) and irAEs, underscoring their dual role in efficacy and safety monitoring.Together, these studies highlight the complementary roles of CTCs, cfRNA oncRNAs, and immune markers in capturing both tumor-intrinsic and host-mediated mechanisms. This dissertation contributes to the growing body of evidence supporting liquid biopsy as a powerful, real-time tool for precision monitoring in early-stage breast cancer. The findings have potential implications for treatment tailoring, clinical trial design, and risk-adapted therapy strategies. Further validation in larger, independent cohorts is warranted to support clinical implementation.
일반주제명  
Pharmaceutical sciences
일반주제명  
Oncology
일반주제명  
Bioinformatics
일반주제명  
Pharmacology
키워드  
Biomarkers
키워드  
Breast cancer
키워드  
Clinical trials
키워드  
Worse outcomes
키워드  
Response
키워드  
Toxicity
기타저자  
University of California, San Francisco Pharmaceutical Sciences and Pharmacogenomics
기본자료저록  
Dissertations Abstracts International. 86-12B.
전자적 위치 및 접속  
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MARC

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■1001  ▼aAlkhafaji,  Silver.▼0(orcid)0000-0002-2248-1381
■24510▼aIdentifying  Blood-Based  Biomarkers  of  Efficacy,  Toxicity  and  Outcome  in  Early-Stage  Breast  Cancer
■260    ▼a[Sl]▼bUniversity  of  California,  San  Francisco▼c2025
■260  1▼aAnn  Arbor▼bProQuest  Dissertations  &  Theses▼c2025
■300    ▼a100  p
■500    ▼aSource:  Dissertations  Abstracts  International,  Volume:  86-12,  Section:  B.
■500    ▼aIncludes  supplementary  digital  materials.
■500    ▼aAdvisor:  Veer,  Laura  Van  'T;Kroetz,  Deanna.
■5021  ▼aThesis  (Ph.D.)--University  of  California,  San  Francisco,  2025.
■520    ▼aThe  emergence  of  blood-based  biomarkers  has  transformed  the  landscape  of  precision  oncology,  offering  minimally  invasive  tools  to  guide  treatment  decisions  and  monitor  disease  dynamics.  This  dissertation  investigates  the  prognostic  and  predictive  value  of  circulating  tumor  cells  (CTCs),  cell-free  orphan  non-coding  RNAs  (oncRNAs),  and  serum  immune  markers  in  early-stage  breast  cancer,  leveraging  the  TIPPING  and  I-SPY2  clinical  trial  platforms.In  Chapter  2,  we  evaluated  CTCs  in  the  TIPPING  study,  revealing  that  patients  with  invasive  lobular  carcinoma  (ILC)  have  significantly  higher  CTC  counts  than  those  with  invasive  ductal  carcinoma  (IDC),  even  at  early  disease  stages.  These  histology-specific  differences  were  associated  with  worse  outcomes  and  support  the  implementation  of  subtype-specific  CTC  thresholds  for  prognostication  and  therapeutic  stratification.Chapter  3  focused  on  the  development  and  validation  of  a  continuous  oncRNA  risk  score  derived  from  circulating  cfRNAs  in  the  I-SPY2  trial.  The  score  was  predictive  of  distant  recurrence-free  survival  (DRFS)  and  provided  prognostic  value  independent  of  established  clinicopathologic  features,  including  Residual  Cancer  Burden  (RCB),  nodal  status,  and  MammaPrint  risk.  These  findings  support  the  clinical  utility  of  tumor-naive  cfRNA  assays  for  individualized  recurrence  risk  assessment.In  Chapter  4,  we  explored  serum  immune  markers  as  early  indicators  of  treatment  response  and  immune-related  adverse  events  (irAEs)  in  patients  treated  with  immune  checkpoint  inhibitors  within  I-SPY2.  Specific  cytokines  and  checkpoint  molecules  were  associated  with  both  pathologic  complete  response  (pCR)  and  irAEs,  underscoring  their  dual  role  in  efficacy  and  safety  monitoring.Together,  these  studies  highlight  the  complementary  roles  of  CTCs,  cfRNA  oncRNAs,  and  immune  markers  in  capturing  both  tumor-intrinsic  and  host-mediated  mechanisms.  This  dissertation  contributes  to  the  growing  body  of  evidence  supporting  liquid  biopsy  as  a  powerful,  real-time  tool  for  precision  monitoring  in  early-stage  breast  cancer.  The  findings  have  potential  implications  for  treatment  tailoring,  clinical  trial  design,  and  risk-adapted  therapy  strategies.  Further  validation  in  larger,  independent  cohorts  is  warranted  to  support  clinical  implementation.
■590    ▼aSchool  code:  0034.
■650  4▼aPharmaceutical  sciences
■650  4▼aOncology
■650  4▼aBioinformatics
■650  4▼aPharmacology
■653    ▼aBiomarkers
■653    ▼aBreast  cancer
■653    ▼aClinical  trials
■653    ▼aWorse  outcomes
■653    ▼aResponse
■653    ▼aToxicity
■690    ▼a0572
■690    ▼a0992
■690    ▼a0715
■690    ▼a0419
■71020▼aUniversity  of  California,  San  Francisco▼bPharmaceutical  Sciences  and  Pharmacogenomics.
■7730  ▼tDissertations  Abstracts  International▼g86-12B.
■790    ▼a0034
■791    ▼aPh.D.
■792    ▼a2025
■793    ▼aEnglish
■85640▼uhttp://www.riss.kr/pdu/ddodLink.do?id=T17357209▼nKERIS▼z이  자료의  원문은  한국교육학술정보원에서  제공합니다.

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